Reads Filter Settings

Read Score (Required)

Set a minimum average read quality score to filter the reads.

Note

  • Default value: 9.
  • If you want to keep all the reads, set the value to 0, or only a postive integer is acceptable.

Read Length (Required)

Set a minimum read length to filter reads.

Note

  • Default value: 500.
  • If you want to keep all the reads, set the value to 0, or only a postive integer is acceptable.

Head Crop (Required)

Note

  • Default value: 50.
  • If you do not want to crop any reads, set the value to 0, or only a postive integer is acceptable.

no_split [1] (Default)

Note

  • Set value: Split reads when an adapter is found in the middle.
[1]Porechop https://github.com/rrwick/Porechop