FAQ¶
What bioinformatics tools are used?¶
- Guppy v2.3.1 https://community.nanoporetech.com
- Porechop 0.2.3 https://github.com/rrwick/Porechop
- NanoStat 1.1.2 https://github.com/wdecoster/nanostat
- NanoFilt 2.2.0 https://github.com/wdecoster/nanofilt
- Canu v1.8 https://github.com/marbl/canu
- Flye 2.4-release https://github.com/fenderglass/Flye
- Unicycler v0.4.8-beta https://github.com/rrwick/Unicycler
Where can I find output files?¶
\Basecalled(reads after basecalling)\Barcodes(reads after demultiplexing)\Analysis\AdapterTrimmedFiles(reads after adapter trimming)\Analysis\FiltedFiles(reads after filtering)\Analysis\StatFiles(statitstical data before and after filtering)\Analysis\Logs(log files)\Assembly(reads after assembly)