Basecalling Settings

Flowcell ID (Required)

Choose the Flowcell ID from the select list.

Kit Number (Requied)

Choose the kit number from the select list.

Barcode kit (Optional)

Choose the barcode kit(s) from the list if used.

Note

  • If no barcode kit was used, leave it blank.
  • Choose by press Ctrl to select multiple barcode kits.

cpu_threads_per_caller [1] (Default)

Note

  • Set value: 1.

records_per_fastq [2] (Default)

Note

  • select value: 0.
  • Use a single file (per worker, per run id).

recursive [2] (Default)

Note

  • Set value: search for input files recursively.

enable_trimming [2] (Default)

Note

  • Set value: enable trimming of the adapter from the beginning of the read before basecalling.
[1]Guppy v2.3.1 Release https://community.nanoporetech.com/posts/guppy-2-3-1-release
[2](1, 2, 3) How to configure Guppy parameters https://community.nanoporetech.com/protocols/Guppy-protocol-preRev/v/gpb_2003_v1_revg_14dec2018/how-to-configure-guppy-parameters